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PDBsum entry 4mxc

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protein ligands links
Transferase/transferase inhibitor PDB id
4mxc

 

 

 

 

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Contents
Protein chain
290 a.a.
Ligands
DWF
Waters ×204
PDB id:
4mxc
Name: Transferase/transferase inhibitor
Title: Crystal structure of cmet in complex with novel inhibitor
Structure: Hepatocyte growth factor receptor. Chain: a. Fragment: protein kinase domain, unp resodies 1038-1346. Synonym: hgf receptor, hgf/sf receptor, proto-oncogenE C-met, scatter factor receptor, sf receptor, tyrosine-protein kinase met. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: cmet, met. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.63Å     R-factor:   0.181     R-free:   0.208
Authors: Q.F.Liu,T.T.Chen,Y.C.Xu
Key ref: Z.Zhan et al. (2014). Discovery of Anilinopyrimidines as Dual Inhibitors of c-Met and VEGFR-2: Synthesis, SAR, and Cellular Activity. Acs Med Chem Lett, 5, 673-678. PubMed id: 24944742 DOI: 10.1021/ml500066m
Date:
26-Sep-13     Release date:   15-Oct-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08581  (MET_HUMAN) -  Hepatocyte growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1390 a.a.
290 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1021/ml500066m Acs Med Chem Lett 5:673-678 (2014)
PubMed id: 24944742  
 
 
Discovery of Anilinopyrimidines as Dual Inhibitors of c-Met and VEGFR-2: Synthesis, SAR, and Cellular Activity.
Z.Zhan, J.Ai, Q.Liu, Y.Ji, T.Chen, Y.Xu, M.Geng, W.Duan.
 
  ABSTRACT  
 
Both c-Met and VEGFR-2 are important targets for cancer therapies. Here we report a series of potent dual c-Met and VEGFR-2 inhibitors bearing an anilinopyrimidine scaffold. Two novel synthetic protocols were employed for rapid analoguing of the designed molecules for structure-activity relationship (SAR) exploration. Some analogues displayed nanomolar potency against c-Met and VEGFR-2 at enzymatic level. Privileged compounds 3a, 3b, 3g, 3h, and 18a exhibited potent antiproliferative effect against c-Met addictive cell lines with IC50 values ranged from 0.33 to 1.7 μM. In addition, a cocrystal structure of c-Met in complex with 3h has been determined, which reveals the binding mode of c-Met to its inhibitor and helps to interpret the SAR of the analogues.
 

 

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