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PDBsum entry 4msp

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4msp calculated with MOLE 2.0 PDB id
4msp
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.97 3.37 28.2 -1.75 -0.35 25.0 76 5 4 1 4 0 2 0  1PE 205 A
2 1.72 4.49 34.6 -2.37 -0.49 33.6 72 5 3 0 2 1 0 0  1PE 205 A
3 3.05 3.04 39.1 -1.02 -0.49 18.3 83 4 4 2 4 0 0 0  
4 2.95 3.36 48.2 -1.47 -0.27 20.2 70 4 1 1 3 1 2 0  1PE 205 A
5 1.77 2.76 53.0 -3.14 -0.59 37.8 85 7 6 3 1 0 0 0  PGO 204 B PGO 205 B
6 2.00 3.44 64.9 -2.10 -0.37 30.9 75 6 3 0 5 1 1 0  1PE 205 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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