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PDBsum entry 4msa

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4msa calculated with MOLE 2.0 PDB id
4msa
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 47.6 -0.84 0.02 16.2 84 5 3 4 6 4 0 0  2ZM 900 A
2 1.16 1.58 51.1 -1.02 -0.23 24.8 82 7 4 1 6 1 1 0  
3 1.16 1.30 55.5 -0.02 0.17 14.9 84 6 3 3 9 4 0 0  2ZM 900 A
4 1.43 1.44 55.8 -1.25 -0.53 19.4 84 3 5 3 4 0 0 0  
5 0.99 1.02 59.5 -1.36 -0.13 14.8 78 3 2 1 5 2 2 0  
6 1.00 0.95 63.8 -0.89 0.00 16.7 82 5 4 3 7 2 1 0  
7 1.59 3.27 99.8 -1.02 -0.47 18.5 85 3 6 3 6 0 0 0  
8 1.37 1.40 118.7 -0.27 0.20 12.6 78 6 4 4 10 7 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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