 |
PDBsum entry 4mgi
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4mgi calculated with MOLE 2.0
|
PDB id
|
|
|
|
4mgi
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
4 pores,
coloured by radius
|
4 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.39 |
2.15 |
54.1 |
-1.86 |
-0.66 |
20.4 |
87 |
 |
7 |
5 |
6 |
2 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.45 |
3.01 |
39.3 |
0.39 |
-0.01 |
11.2 |
85 |
5 |
2 |
1 |
11 |
1 |
0 |
0 |
CMP 1001 E
|
 |
3 |
 |
1.33 |
1.58 |
77.5 |
-0.26 |
-0.11 |
16.8 |
81 |
4 |
8 |
1 |
10 |
3 |
1 |
0 |
CMP 1001 E
|
 |
4 |
 |
1.85 |
1.85 |
38.2 |
-1.24 |
-0.49 |
21.4 |
80 |
4 |
5 |
0 |
3 |
0 |
3 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |