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PDBsum entry 4mfc
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Tunnel analysis for: 4mfc calculated with  MOLE 2.0
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PDB id
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4mfc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
1.57 |
19.2 |
-1.12 |
-0.50 |
15.3 |
92 |
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3 |
0 |
1 |
1 |
0 |
0 |
0 |
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DG 9 T DC 10 T DA 11 T DT 12 T
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2 |
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1.23 |
1.23 |
23.7 |
-1.36 |
-0.26 |
17.0 |
84 |
2 |
1 |
2 |
2 |
1 |
1 |
0 |
DG 9 P DC 8 T DG 9 T DC 10 T
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3 |
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1.39 |
1.56 |
31.1 |
-1.56 |
-0.62 |
12.1 |
89 |
4 |
0 |
3 |
2 |
0 |
0 |
0 |
DG 7 P DG 9 T DC 10 T DA 11 T DT 12 T DC 13 T DA
14 T
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4 |
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1.39 |
1.62 |
31.5 |
-1.13 |
-0.63 |
11.0 |
95 |
3 |
0 |
3 |
2 |
0 |
0 |
0 |
DT 6 P DG 7 P DG 9 T DC 10 T DA 11 T DT 12 T DC
13 T DA 14 T
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5 |
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1.24 |
1.23 |
39.7 |
-2.37 |
-0.40 |
32.8 |
83 |
5 |
3 |
2 |
2 |
2 |
0 |
0 |
MG 401 A 0KX 404 A DG 9 P DA 10 P 6OG 6 T DC 8 T
DG 9 T DC 10 T
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6 |
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1.23 |
1.24 |
39.7 |
-1.93 |
-0.29 |
24.5 |
78 |
4 |
2 |
2 |
2 |
2 |
0 |
0 |
0KX 404 A DG 9 P DA 10 P DC 5 T 6OG 6 T DT 7 T DC
8 T DG 9 T DC 10 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program