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PDBsum entry 4mdk
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Pore analysis for: 4mdk calculated with  MOLE 2.0
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PDB id
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4mdk
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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22 pores,
coloured by radius
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22 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
2.43 |
25.6 |
-1.92 |
-0.68 |
17.0 |
92 |
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3 |
1 |
2 |
0 |
0 |
0 |
0 |
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2 |
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1.30 |
1.58 |
26.3 |
-0.40 |
0.27 |
4.7 |
81 |
2 |
0 |
2 |
3 |
2 |
1 |
0 |
U94 201 C
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3 |
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1.16 |
1.21 |
28.9 |
-1.39 |
0.26 |
12.2 |
75 |
3 |
2 |
1 |
1 |
4 |
0 |
0 |
U94 201 C
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4 |
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2.09 |
2.09 |
33.0 |
-2.32 |
-0.79 |
23.6 |
91 |
2 |
6 |
5 |
1 |
0 |
1 |
0 |
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5 |
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1.17 |
1.91 |
34.3 |
0.66 |
0.36 |
3.7 |
83 |
2 |
1 |
1 |
7 |
3 |
1 |
0 |
U94 201 D
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6 |
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2.08 |
2.08 |
44.3 |
-1.56 |
-0.56 |
16.8 |
88 |
2 |
7 |
5 |
2 |
1 |
2 |
0 |
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7 |
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1.18 |
1.63 |
47.5 |
-2.44 |
-0.48 |
29.2 |
76 |
5 |
3 |
0 |
1 |
2 |
1 |
0 |
U94 201 A
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8 |
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1.71 |
1.71 |
53.2 |
-1.80 |
-0.42 |
18.2 |
79 |
4 |
5 |
4 |
2 |
4 |
1 |
0 |
U94 201 D
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9 |
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1.27 |
1.28 |
61.9 |
-1.37 |
-0.46 |
18.7 |
82 |
3 |
4 |
4 |
3 |
3 |
2 |
1 |
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10 |
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1.79 |
1.79 |
63.0 |
-1.52 |
-0.22 |
21.1 |
76 |
5 |
3 |
4 |
1 |
5 |
0 |
0 |
U94 201 C
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11 |
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1.71 |
1.71 |
63.3 |
-1.52 |
-0.42 |
17.1 |
79 |
3 |
7 |
4 |
3 |
4 |
2 |
0 |
U94 201 D
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12 |
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1.31 |
2.24 |
67.2 |
-0.45 |
0.01 |
9.0 |
74 |
3 |
1 |
2 |
4 |
3 |
4 |
0 |
U94 201 C
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13 |
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1.20 |
1.25 |
69.6 |
-1.22 |
-0.16 |
11.2 |
71 |
2 |
3 |
2 |
3 |
5 |
4 |
0 |
U94 201 C
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14 |
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1.70 |
1.70 |
72.3 |
-1.40 |
-0.36 |
14.7 |
79 |
3 |
6 |
5 |
4 |
5 |
2 |
0 |
U94 201 D
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15 |
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1.74 |
1.74 |
80.7 |
-1.34 |
-0.56 |
13.1 |
86 |
5 |
2 |
7 |
3 |
1 |
2 |
0 |
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16 |
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1.17 |
1.22 |
81.2 |
-1.39 |
0.00 |
17.4 |
78 |
6 |
5 |
5 |
3 |
7 |
0 |
0 |
U94 201 C
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17 |
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1.59 |
2.19 |
90.0 |
-0.88 |
-0.36 |
12.6 |
81 |
5 |
4 |
7 |
4 |
3 |
3 |
1 |
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18 |
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1.46 |
1.45 |
91.7 |
-1.54 |
-0.32 |
21.1 |
80 |
5 |
5 |
6 |
2 |
4 |
2 |
0 |
U94 201 C
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19 |
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2.42 |
2.61 |
91.5 |
-1.84 |
-0.48 |
19.5 |
82 |
5 |
4 |
4 |
5 |
1 |
4 |
0 |
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20 |
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1.63 |
1.63 |
94.7 |
-1.00 |
-0.42 |
11.5 |
79 |
3 |
5 |
6 |
3 |
5 |
4 |
0 |
U94 201 B
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21 |
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1.28 |
1.46 |
98.2 |
-1.12 |
-0.30 |
16.9 |
82 |
5 |
4 |
5 |
8 |
2 |
3 |
0 |
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22 |
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1.55 |
1.55 |
110.5 |
-1.25 |
-0.49 |
16.1 |
79 |
6 |
7 |
7 |
6 |
4 |
5 |
0 |
U94 201 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program