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PDBsum entry 4m9e
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Tunnel analysis for: 4m9e calculated with  MOLE 2.0
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PDB id
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4m9e
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.44 |
1.44 |
18.7 |
-1.14 |
-0.60 |
14.7 |
85 |
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3 |
1 |
0 |
2 |
1 |
0 |
0 |
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DG 4 B 5CM 5 B DG 6 B DT 7 B
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2 |
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1.38 |
1.38 |
19.8 |
-1.32 |
-0.36 |
16.7 |
88 |
4 |
0 |
3 |
1 |
2 |
0 |
0 |
DG 6 B DT 7 B DG 1 C DC 2 C DC 3 C
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3 |
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1.13 |
1.25 |
21.6 |
-1.31 |
-0.62 |
16.5 |
90 |
2 |
1 |
1 |
1 |
1 |
0 |
0 |
DG 6 B DT 7 B DC 3 C DA 4 C
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4 |
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1.44 |
1.44 |
21.7 |
-1.01 |
-0.59 |
11.9 |
83 |
3 |
0 |
0 |
1 |
1 |
0 |
0 |
DG 4 B 5CM 5 B DG 6 B DT 7 B DC 8 C DT 9 C
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5 |
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1.44 |
1.44 |
29.6 |
-1.01 |
-0.31 |
15.2 |
76 |
5 |
1 |
0 |
2 |
3 |
0 |
0 |
DA 2 B DG 3 B DG 4 B 5CM 5 B DG 6 B DT 7 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program