PDBsum entry 4lyh Go to PDB code:  Tunnel analysis for: 4lyh calculated with MOLE 2.0 PDB id 4lyh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.40 21.3 -2.61 -0.70 33.0 76 5 3 0 0 0 1 0   2 1.39 1.40 35.2 -2.54 -0.67 34.2 84 5 7 1 1 0 1 0   3 1.66 2.49 17.6 0.21 0.30 6.1 81 1 0 1 5 2 0 0  21F 202 C 4 1.52 1.53 33.4 -0.55 0.13 20.4 77 3 2 1 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.