PDBsum entry 4lue

Pore analysis for: 4lue calculated with

MOLE 2.0

PDB id

4lue

Pores calculated on whole structure

Pores calculated excluding ligands

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3 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.21

1.41

32.7

1.35

0.23

4.5

84

1

2

1

8

1

0

0

VSE 602 A

2

1.51

2.50

33.8

1.56

0.39

8.5

86

1

2

1

12

0

0

0

VSE 602 A GOL 605 A

3

1.22

1.41

34.5

0.52

-0.11

7.5

80

2

2

2

6

1

0

0

VSE 602 A GOL 605 A

4

1.60

2.50

34.8

1.51

0.40

8.7

86

1

3

1

12

0

0

0

VSE 603 B GOL 606 B

5

2.76

2.78

45.3

-1.74

-0.75

14.0

87

2

5

7

2

1

1

0

6

2.16

2.40

62.3

-1.75

-0.50

19.6

86

6

8

10

2

3

0

0

7

1.21

1.41

64.8

0.11

-0.12

9.9

82

2

7

3

8

2

0

0

VSE 602 A

8

1.23

1.42

66.7

-0.42

-0.34

12.0

80

3

7

4

6

2

0

0

VSE 602 A GOL 605 A

9

1.10

1.26

70.6

-2.18

-0.82

19.3

85

3

9

7

2

1

1

0

10

1.62

2.50

96.2

0.40

0.24

11.2

85

3

3

4

14

1

3

0

GOL 602 B VSE 603 B

11

1.21

1.11

107.4

-0.63

-0.18

12.1

82

4

4

7

10

2

4

0

GOL 602 B VSE 603 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.