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PDBsum entry 4lud

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4lud calculated with MOLE 2.0 PDB id
4lud
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.66 25.6 -2.86 -0.73 29.6 83 4 4 3 0 1 0 0  PTR 527 B
2 1.62 1.68 30.1 0.77 -0.04 6.3 82 2 1 1 8 0 0 0  SK8 603 A
3 1.29 1.52 39.1 -0.19 -0.20 12.0 84 3 2 3 6 1 0 0  SK8 601 B CA 602 B GOL 605 B
4 2.22 2.44 44.4 -1.68 -0.37 21.3 87 5 9 6 2 2 0 0  
5 2.24 2.40 52.6 -1.60 -0.35 20.0 85 5 7 7 2 3 0 0  
6 1.79 1.79 98.1 -1.56 -0.60 16.3 80 5 8 5 3 1 3 0  CA 601 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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