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PDBsum entry 4ltc

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4ltc calculated with MOLE 2.0 PDB id
4ltc
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 2.46 49.3 -0.43 -0.08 18.0 86 5 4 3 4 1 0 0  
2 1.56 1.77 82.1 -2.51 -0.43 30.4 77 10 7 4 4 4 0 0  
3 1.53 2.10 99.7 -2.83 -0.49 34.1 75 13 11 5 3 6 0 0  
4 2.02 2.52 104.0 -2.29 -0.32 28.7 80 16 10 6 6 5 0 0  
5 1.29 1.35 106.9 -2.41 -0.45 28.1 78 14 10 6 5 4 0 0  
6 2.02 2.89 112.4 -2.72 -0.48 32.2 76 13 12 5 4 8 1 0  
7 2.06 2.53 121.5 -2.31 -0.39 27.9 80 14 9 8 6 7 0 0  
8 1.32 1.76 126.5 -2.05 -0.37 23.6 78 14 10 9 9 7 1 0  
9 1.84 1.84 136.1 -2.00 -0.34 26.8 74 17 10 5 8 6 3 0  
10 2.03 2.03 138.4 -2.50 -0.37 29.9 79 22 12 8 6 6 2 0  
11 1.84 1.84 147.7 -1.92 -0.35 24.9 74 12 8 5 8 7 3 0  
12 2.02 2.02 150.0 -2.43 -0.40 28.4 79 17 10 8 6 7 2 0  
13 1.54 1.68 161.5 -1.82 -0.32 25.2 80 18 11 7 8 7 0 1  
14 1.56 1.74 174.4 -1.97 -0.30 27.1 78 26 12 5 8 7 0 1  
15 1.18 1.45 184.4 -1.81 -0.35 25.0 81 22 13 7 9 6 0 1  
16 2.10 2.20 194.0 -2.49 -0.45 25.8 79 19 9 11 5 9 1 0  
17 2.47 4.21 194.5 -2.42 -0.48 24.0 79 14 8 12 6 10 1 0  
18 1.74 4.23 203.2 -2.42 -0.46 26.1 80 27 12 11 6 8 0 0  
19 2.05 3.93 203.7 -2.37 -0.47 25.1 80 22 11 12 7 9 0 0  
20 1.77 2.88 208.9 -2.33 -0.41 27.3 80 22 11 10 10 6 1 0  
21 1.56 1.77 209.3 -2.24 -0.45 25.4 80 17 10 11 11 8 1 0  
22 1.62 1.82 211.6 -2.06 -0.34 24.0 80 27 10 12 9 9 0 0  
23 1.39 1.89 213.5 -1.82 -0.35 21.0 80 18 12 15 9 11 1 0  
24 1.63 1.84 212.0 -2.03 -0.38 23.1 80 22 9 13 10 10 0 0  
25 1.71 3.70 213.0 -1.87 -0.34 21.7 80 23 13 14 8 10 1 0  
26 1.26 1.32 221.5 -2.29 -0.46 24.1 81 26 13 13 8 9 0 0  
27 1.26 1.33 227.2 -2.19 -0.44 25.1 81 21 12 12 12 6 1 0  
28 1.26 1.49 231.3 -1.77 -0.36 20.1 81 22 14 16 10 10 1 0  
29 1.35 2.31 262.2 -1.73 -0.33 18.6 78 21 10 18 9 15 2 0  
30 1.35 2.32 261.8 -1.80 -0.33 19.4 78 26 11 17 8 14 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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