PDBsum entry 4lqq

Pore analysis for: 4lqq calculated with

MOLE 2.0

PDB id

4lqq

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.47

1.59

33.0

0.88

0.54

11.7

76

4

2

0

9

4

0

0

2

1.52

1.76

38.9

1.52

0.77

5.8

77

3

1

1

9

4

0

0

3

1.42

1.43

59.9

0.04

-0.14

7.5

86

4

2

4

9

4

0

0

4

1.35

1.50

68.1

-1.17

-0.35

12.4

84

3

4

4

5

3

2

0

5

2.14

2.45

68.8

-0.75

-0.19

15.9

75

5

4

3

7

6

0

0

6

1.66

1.82

70.5

-0.06

0.02

12.9

83

3

5

5

7

4

0

0

7

1.43

2.47

78.5

-0.34

0.20

13.8

73

4

2

2

6

10

1

0

8

1.87

1.98

84.0

-0.80

-0.16

14.9

77

5

4

4

5

8

0

0

ANP 801 A

9

2.01

3.62

113.9

-0.34

0.12

17.3

86

9

4

4

13

4

1

0

10

2.21

2.38

118.2

-1.50

-0.34

20.0

81

10

6

7

9

5

0

0

11

1.80

1.96

125.0

-1.22

-0.40

15.9

80

10

8

6

9

7

0

0

12

2.27

3.15

129.3

-1.59

-0.33

21.3

79

8

5

4

5

6

1

0

13

1.40

1.92

134.0

-1.18

-0.05

18.1

74

11

7

4

7

8

1

0

14

2.06

2.21

160.2

-1.18

-0.31

16.5

78

13

8

8

8

13

0

0

ANP 801 A

15

1.80

1.96

174.5

-0.95

-0.29

16.1

82

9

8

9

15

5

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.