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PDBsum entry 4lmo

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4lmo calculated with MOLE 2.0 PDB id
4lmo
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 1.45 25.8 -0.84 -0.33 15.6 78 2 2 1 3 1 1 0  
2 2.36 2.93 32.8 -1.64 -0.55 20.1 84 3 3 4 3 0 1 0  
3 2.35 2.94 33.7 -2.01 -0.59 23.6 81 4 3 3 4 0 1 0  
4 1.37 1.88 34.8 -0.94 -0.50 13.0 81 3 2 3 3 1 0 0  
5 2.35 2.94 40.6 -1.97 -0.59 22.6 83 7 3 5 3 0 1 0  
6 1.68 4.04 42.7 -1.86 -0.03 13.9 78 6 3 4 4 4 0 0  
7 1.31 1.58 44.1 -0.31 -0.39 9.4 83 3 4 3 6 0 0 0  
8 1.29 1.49 47.1 -0.82 -0.25 16.0 75 6 1 3 3 3 0 0  
9 1.31 1.55 50.2 -0.79 -0.18 18.5 79 6 3 3 4 3 1 0  
10 1.25 3.32 50.3 -1.71 -0.43 22.8 77 6 3 3 4 3 1 0  
11 1.27 1.48 51.6 -0.17 -0.09 15.2 80 6 3 4 5 1 0 0  
12 1.24 1.33 53.6 -0.87 -0.48 13.5 85 4 5 3 7 0 0 0  
13 1.37 1.59 54.2 -1.23 -0.08 25.2 84 9 3 4 4 2 0 0  
14 1.20 1.48 54.6 -0.15 -0.11 12.2 81 5 4 4 6 2 0 0  
15 1.24 1.47 55.3 -0.11 -0.13 12.3 79 5 3 3 6 2 0 0  
16 1.20 1.32 73.6 -0.52 -0.24 16.5 82 7 5 3 9 2 0 0  
17 1.50 1.50 76.6 -1.58 -0.41 21.2 86 9 1 7 1 2 0 0  
18 1.22 1.44 112.9 -1.11 -0.32 20.3 84 12 7 5 9 1 0 0  
19 1.21 1.47 119.5 -0.56 -0.20 16.8 84 11 5 7 8 3 0 0  
20 1.18 1.40 157.0 -2.10 -0.43 25.8 82 13 5 9 4 5 0 0  
21 1.31 1.32 298.9 -1.48 -0.32 23.3 84 31 14 14 16 6 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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