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PDBsum entry 4lmo
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Pore analysis for: 4lmo calculated with MOLE 2.0
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PDB id
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4lmo
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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21 pores,
coloured by radius |
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21 pores,
coloured by radius
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21 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.30 |
1.45 |
25.8 |
-0.84 |
-0.33 |
15.6 |
78 |
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2 |
2 |
1 |
3 |
1 |
1 |
0 |
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2 |
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2.36 |
2.93 |
32.8 |
-1.64 |
-0.55 |
20.1 |
84 |
3 |
3 |
4 |
3 |
0 |
1 |
0 |
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3 |
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2.35 |
2.94 |
33.7 |
-2.01 |
-0.59 |
23.6 |
81 |
4 |
3 |
3 |
4 |
0 |
1 |
0 |
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4 |
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1.37 |
1.88 |
34.8 |
-0.94 |
-0.50 |
13.0 |
81 |
3 |
2 |
3 |
3 |
1 |
0 |
0 |
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5 |
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2.35 |
2.94 |
40.6 |
-1.97 |
-0.59 |
22.6 |
83 |
7 |
3 |
5 |
3 |
0 |
1 |
0 |
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6 |
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1.68 |
4.04 |
42.7 |
-1.86 |
-0.03 |
13.9 |
78 |
6 |
3 |
4 |
4 |
4 |
0 |
0 |
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7 |
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1.31 |
1.58 |
44.1 |
-0.31 |
-0.39 |
9.4 |
83 |
3 |
4 |
3 |
6 |
0 |
0 |
0 |
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8 |
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1.29 |
1.49 |
47.1 |
-0.82 |
-0.25 |
16.0 |
75 |
6 |
1 |
3 |
3 |
3 |
0 |
0 |
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9 |
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1.31 |
1.55 |
50.2 |
-0.79 |
-0.18 |
18.5 |
79 |
6 |
3 |
3 |
4 |
3 |
1 |
0 |
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10 |
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1.25 |
3.32 |
50.3 |
-1.71 |
-0.43 |
22.8 |
77 |
6 |
3 |
3 |
4 |
3 |
1 |
0 |
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11 |
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1.27 |
1.48 |
51.6 |
-0.17 |
-0.09 |
15.2 |
80 |
6 |
3 |
4 |
5 |
1 |
0 |
0 |
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12 |
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1.24 |
1.33 |
53.6 |
-0.87 |
-0.48 |
13.5 |
85 |
4 |
5 |
3 |
7 |
0 |
0 |
0 |
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13 |
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1.37 |
1.59 |
54.2 |
-1.23 |
-0.08 |
25.2 |
84 |
9 |
3 |
4 |
4 |
2 |
0 |
0 |
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14 |
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1.20 |
1.48 |
54.6 |
-0.15 |
-0.11 |
12.2 |
81 |
5 |
4 |
4 |
6 |
2 |
0 |
0 |
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15 |
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1.24 |
1.47 |
55.3 |
-0.11 |
-0.13 |
12.3 |
79 |
5 |
3 |
3 |
6 |
2 |
0 |
0 |
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16 |
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1.20 |
1.32 |
73.6 |
-0.52 |
-0.24 |
16.5 |
82 |
7 |
5 |
3 |
9 |
2 |
0 |
0 |
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17 |
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1.50 |
1.50 |
76.6 |
-1.58 |
-0.41 |
21.2 |
86 |
9 |
1 |
7 |
1 |
2 |
0 |
0 |
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18 |
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1.22 |
1.44 |
112.9 |
-1.11 |
-0.32 |
20.3 |
84 |
12 |
7 |
5 |
9 |
1 |
0 |
0 |
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19 |
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1.21 |
1.47 |
119.5 |
-0.56 |
-0.20 |
16.8 |
84 |
11 |
5 |
7 |
8 |
3 |
0 |
0 |
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20 |
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1.18 |
1.40 |
157.0 |
-2.10 |
-0.43 |
25.8 |
82 |
13 |
5 |
9 |
4 |
5 |
0 |
0 |
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21 |
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1.31 |
1.32 |
298.9 |
-1.48 |
-0.32 |
23.3 |
84 |
31 |
14 |
14 |
16 |
6 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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