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PDBsum entry 4llj

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4llj calculated with MOLE 2.0 PDB id
4llj
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.20 38.6 -0.95 -0.39 10.0 84 3 1 1 2 0 1 0  
2 1.25 1.34 47.9 -1.24 -0.42 14.7 86 3 2 1 3 0 1 0  
3 1.30 1.30 67.5 -1.27 -0.18 17.3 83 6 4 6 7 5 0 0  1XN 900 A
4 1.18 1.36 70.3 -0.35 -0.01 10.2 76 6 2 4 7 7 2 0  
5 1.77 1.93 71.3 -1.69 -0.40 16.5 77 7 5 6 3 4 2 0  
6 1.44 2.42 72.1 -0.29 0.13 10.5 78 5 3 6 7 6 1 0  
7 1.30 1.29 84.6 -0.87 -0.07 13.0 80 8 4 7 8 7 2 0  1XN 900 A
8 1.22 1.43 94.2 -0.79 -0.10 16.2 77 8 5 5 9 7 2 0  
9 1.44 1.53 95.2 -0.54 0.12 15.7 78 8 6 7 9 7 1 0  
10 1.27 1.40 107.4 -0.21 0.14 12.9 79 9 4 6 14 10 2 0  1XN 900 A
11 1.29 1.30 108.5 -0.14 0.25 12.8 80 9 5 8 14 10 1 0  1XN 900 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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