PDBsum entry 4ljp Go to PDB code:  Tunnel analysis for: 4ljp calculated with MOLE 2.0 PDB id 4ljp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 2.06 19.9 -2.06 -0.06 24.9 71 4 4 0 2 4 0 0   2 1.30 1.31 22.6 -2.05 -0.61 28.7 79 5 4 1 4 0 0 0   3 1.28 2.07 23.2 -2.11 -0.28 28.7 73 3 4 0 3 2 0 0   4 1.30 1.30 23.2 -1.15 -0.27 18.9 81 4 3 1 4 1 0 0   5 1.29 1.29 23.7 -1.25 -0.37 17.0 86 2 1 1 4 1 0 0   6 1.28 2.11 32.0 -1.55 -0.47 19.2 76 3 6 0 2 2 0 0   7 1.30 1.47 32.1 -0.91 -0.22 15.7 89 3 2 4 6 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.