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PDBsum entry 4ljh

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ljh calculated with MOLE 2.0 PDB id
4ljh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.87 2.22 21.5 -1.47 -0.06 5.4 62 0 1 3 0 3 2 0  
2 1.42 3.63 24.4 -1.49 -0.04 5.9 63 0 1 3 0 4 2 0  
3 1.05 1.25 17.9 -0.99 -0.49 2.8 93 0 0 4 2 0 0 0  
4 1.03 1.26 23.0 -0.65 -0.54 2.7 93 0 0 3 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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