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PDBsum entry 4l7d

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4l7d calculated with MOLE 2.0 PDB id
4l7d
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.68 2.68 25.2 -1.30 -0.52 11.4 91 2 1 4 2 0 0 1  ACT 704 B ACT 706 C
2 2.17 2.17 26.9 -0.07 -0.37 6.6 90 1 0 3 6 1 0 1  1VX 701 C
3 2.09 2.09 30.4 -0.37 -0.42 7.2 93 1 0 2 5 2 0 0  1VX 701 A
4 2.10 2.11 53.5 -0.08 -0.13 6.8 87 4 0 3 8 2 0 1  1VX 701 B ACT 702 B ACT 703 B
5 1.47 1.65 54.1 -1.06 -0.51 13.9 87 4 3 2 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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