PDBsum entry 4l3e

Tunnel analysis for: 4l3e calculated with

MOLE 2.0

PDB id

4l3e

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

7 tunnels, coloured by tunnel radius

7 tunnels, coloured by tunnel radius

7 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.20

1.21

17.4

-1.38

-0.31

19.9

82

1

2

1

1

1

1

0

2

1.19

1.21

19.1

-1.61

-0.41

21.2

82

1

4

1

1

1

1

0

3

1.18

1.35

20.2

-1.16

-0.29

18.0

76

1

3

1

2

2

1

0

4

1.20

1.21

22.8

-1.70

-0.40

22.1

86

2

3

2

1

1

1

0

5

1.20

1.21

35.7

-1.98

-0.41

27.8

82

4

4

1

3

1

1

0

6

1.25

1.32

16.4

0.29

0.30

15.8

78

1

1

1

4

2

0

0

7

1.18

1.37

19.5

0.21

0.03

12.5

84

2

1

1

4

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.