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PDBsum entry 4l23

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Pore analysis for: 4l23 calculated with MOLE 2.0 PDB id
4l23
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 2.85 34.5 -1.96 -0.26 19.8 83 5 4 4 2 2 3 1  GOL 702 B
2 1.75 2.32 41.3 -2.19 -0.42 17.8 86 5 4 5 3 1 0 0  GOL 702 B
3 1.87 2.06 43.3 -2.31 -0.56 29.9 85 6 8 2 1 0 0 0  
4 1.46 2.02 45.2 -2.25 -0.45 22.3 83 3 4 3 3 2 1 0  GOL 702 B
5 1.41 1.41 45.7 -1.67 -0.54 24.6 86 5 7 3 3 0 0 0  
6 1.40 1.40 50.3 -1.67 -0.56 24.6 84 5 8 3 3 0 1 1  
7 1.38 1.38 50.5 -1.94 -0.70 24.7 84 4 6 2 4 0 1 0  
8 1.47 2.01 50.6 -1.79 -0.36 21.6 85 5 4 4 5 2 1 0  SO4 1102 A GOL 702 B
9 2.56 4.14 50.6 -1.70 -0.38 24.2 83 4 9 3 4 0 1 0  
10 1.40 1.66 52.1 -1.46 -0.33 19.8 73 5 4 2 3 3 3 1  
11 1.42 1.41 52.0 -1.40 -0.36 16.0 75 5 5 3 1 3 6 2  
12 1.88 2.06 53.7 -2.15 -0.56 29.2 84 6 10 4 2 0 1 1  
13 1.77 1.83 54.2 -2.20 -0.49 28.4 77 8 5 4 4 2 0 0  
14 2.57 4.14 55.2 -1.71 -0.46 24.2 83 4 10 3 4 0 2 1  
15 1.87 2.06 57.1 -2.56 -0.69 30.2 84 6 9 3 3 0 1 0  
16 1.38 1.65 58.4 -1.47 -0.38 18.8 76 6 4 6 3 2 3 1  
17 1.40 1.40 59.4 -2.06 -0.53 21.2 86 6 4 5 4 2 0 0  GOL 702 B
18 1.40 1.67 61.7 -1.31 -0.46 18.0 80 7 4 5 4 1 1 1  
19 1.79 2.32 61.6 -2.94 -0.56 38.4 83 12 9 4 1 1 1 0  
20 1.79 2.37 62.4 -2.45 -0.58 31.2 81 10 11 5 2 1 1 0  
21 1.65 1.66 65.7 -2.48 -0.52 25.7 85 8 7 6 3 2 0 0  GOL 702 B
22 1.44 1.44 66.1 -1.41 -0.39 10.8 78 5 2 6 3 5 6 1  GOL 702 B
23 1.16 2.66 68.5 -1.71 -0.30 16.7 83 5 4 8 5 3 2 0  
24 2.45 3.33 71.3 -2.73 -0.71 33.4 80 11 12 7 2 1 0 0  
25 1.40 1.66 71.8 -2.06 -0.55 27.1 78 8 11 5 1 2 3 1  
26 1.49 1.49 72.4 -2.08 -0.44 22.2 81 5 7 6 3 3 2 0  
27 1.64 1.84 75.1 -1.61 -0.35 14.8 80 7 3 11 7 4 5 0  GOL 702 B
28 2.44 3.34 82.5 -2.52 -0.64 30.3 80 11 8 8 3 2 0 0  
29 1.46 1.50 86.4 -1.41 -0.51 13.4 79 7 5 7 5 3 6 1  
30 0.87 1.83 165.0 -1.98 -0.47 18.2 86 13 11 20 6 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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