 |
PDBsum entry 4l17
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4l17 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4l17
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
8 pores,
coloured by radius
|
8 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.71 |
2.79 |
31.2 |
-2.61 |
-0.38 |
27.6 |
74 |
|
6 |
3 |
1 |
0 |
1 |
0 |
1 |
|
|
 |
|
2 |
 |
4.42 |
4.47 |
32.7 |
-0.57 |
-0.24 |
17.8 |
84 |
5 |
4 |
2 |
6 |
0 |
0 |
0 |
|
|
3 |
 |
3.35 |
3.51 |
38.5 |
-0.74 |
-0.11 |
21.6 |
84 |
7 |
4 |
2 |
5 |
0 |
0 |
0 |
|
|
4 |
 |
2.67 |
2.91 |
40.9 |
-0.27 |
-0.08 |
14.7 |
83 |
6 |
2 |
1 |
5 |
0 |
1 |
0 |
|
|
5 |
 |
2.30 |
2.87 |
44.6 |
-1.16 |
-0.22 |
25.3 |
83 |
8 |
7 |
2 |
5 |
0 |
0 |
0 |
|
|
6 |
 |
2.30 |
2.84 |
47.0 |
-0.92 |
-0.20 |
21.6 |
82 |
7 |
5 |
1 |
5 |
0 |
1 |
0 |
|
|
7 |
 |
2.67 |
2.91 |
51.6 |
-2.09 |
-0.63 |
26.7 |
85 |
6 |
6 |
2 |
2 |
1 |
1 |
0 |
|
 |
8 |
 |
1.94 |
2.97 |
103.2 |
-1.17 |
-0.22 |
20.1 |
81 |
9 |
5 |
5 |
6 |
3 |
0 |
1 |
DNQ 301 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program