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PDBsum entry 4ki5

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protein Protein-protein interface(s) links
Immune system PDB id
4ki5

 

 

 

 

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Contents
Protein chains
218 a.a.
211 a.a.
224 a.a.
209 a.a.
154 a.a.
Waters ×267
PDB id:
4ki5
Name: Immune system
Title: Cystal structure of human factor viii c2 domain in a ternary complex with murine inhbitory antibodies 3e6 and g99
Structure: Murine monoclonal 3e6 fab heavy chain. Chain: c. Murine monoclonal 3e6 fab light chain. Chain: d. Murine monoclonal g99 fab heavy chain. Chain: e. Murine monoclonal g99 fab light chain. Chain: f. Coagulation factor viii.
Source: Mus musculus. Organism_taxid: 10090. Homo sapiens. Human. Organism_taxid: 9606. Gene: f8, f8c. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.47Å     R-factor:   0.190     R-free:   0.238
Authors: J.D.Walter,S.L.Meeks,J.F.Healey,P.Lollar,P.C.Spiegel
Key ref: J.D.Walter et al. (2013). Structure of the factor VIII C2 domain in a ternary complex with 2 inhibitor antibodies reveals classical and nonclassical epitopes. Blood, 122, 4270-4278. PubMed id: 24085769 DOI: 10.1182/blood-2013-08-519124
Date:
01-May-13     Release date:   15-Jan-14    
PROCHECK
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 Headers
 References

Protein chain
No UniProt id for this chain
Struc: 218 a.a.
Protein chain
No UniProt id for this chain
Struc: 211 a.a.
Protein chain
No UniProt id for this chain
Struc: 224 a.a.
Protein chain
No UniProt id for this chain
Struc: 209 a.a.
Protein chain
Pfam   ArchSchema ?
P00451  (FA8_HUMAN) -  Coagulation factor VIII from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
2351 a.a.
154 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
DOI no: 10.1182/blood-2013-08-519124 Blood 122:4270-4278 (2013)
PubMed id: 24085769  
 
 
Structure of the factor VIII C2 domain in a ternary complex with 2 inhibitor antibodies reveals classical and nonclassical epitopes.
J.D.Walter, R.A.Werther, C.M.Brison, R.K.Cragerud, J.F.Healey, S.L.Meeks, P.Lollar, P.C.Spiegel.
 
  ABSTRACT  
 
The factor VIII C2 domain is a highly immunogenic domain, whereby inhibitory antibodies develop following factor VIII replacement therapy for congenital hemophilia A patients. Inhibitory antibodies also arise spontaneously in cases of acquired hemophilia A. The structural basis for molecular recognition by 2 classes of anti-C2 inhibitory antibodies that bind to factor VIII simultaneously was investigated by x-ray crystallography. The C2 domain/3E6 FAB/G99 FAB ternary complex illustrates that each antibody recognizes epitopes on opposing faces of the factor VIII C2 domain. The 3E6 epitope forms direct contacts to the C2 domain at 2 loops consisting of Glu2181-Ala2188 and Thr2202-Arg2215, whereas the G99 epitope centers on Lys2227 and also makes direct contacts with loops Gln2222-Trp2229, Leu2261-Ser2263, His2269-Val2282, and Arg2307-Gln2311. Each binding interface is highly electrostatic, with positive charge present on both C2 epitopes and complementary negative charge on each antibody. A new model of membrane association is also presented, where the 3E6 epitope faces the negatively charged membrane surface and Arg2320 is poised at the center of the binding interface. These results illustrate the potential complexities of the polyclonal anti-factor VIII immune response and further define the "classical" and "nonclassical" types of antibody inhibitors against the factor VIII C2 domain.
 

 

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