PDBsum entry 4ki1

Pore analysis for: 4ki1 calculated with

MOLE 2.0

PDB id

4ki1

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

8 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.27

1.85

26.9

-1.29

-0.33

20.5

74

2

3

1

3

2

2

1

2

1.33

1.36

28.9

-2.48

-0.67

29.4

85

4

1

2

0

1

0

0

3

2.30

2.30

39.3

-0.99

-0.57

5.3

73

2

0

4

2

2

4

0

4

3.36

3.37

40.0

-1.16

-0.44

13.3

79

1

3

5

4

3

2

0

5

2.28

2.47

55.8

-1.16

-0.34

11.2

78

2

3

6

4

3

5

0

6

1.26

1.40

75.2

-1.26

-0.41

20.5

81

7

6

4

5

0

4

1

7

1.28

1.43

95.2

-1.60

-0.36

25.9

83

10

5

5

7

0

3

1

8

3.04

3.31

101.4

-1.50

-0.57

13.8

79

4

5

8

3

2

8

0

9

1.25

1.73

109.0

-1.22

-0.19

21.9

76

8

7

4

7

3

3

1

10

1.25

1.40

117.8

-1.38

-0.33

20.1

80

9

5

5

7

1

6

1

11

1.13

1.24

139.0

-1.37

-0.40

20.1

80

9

12

9

6

3

4

1

BMA 3 J MAN 5 J

12

1.26

1.43

32.2

-1.27

-0.30

23.4

80

4

3

1

3

0

1

1

13

1.19

2.66

34.9

0.28

0.08

16.8

77

2

1

0

7

0

2

0

14

1.26

1.43

34.1

-1.25

-0.32

22.6

80

4

3

1

3

0

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.