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PDBsum entry 4khq

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Protein chain A PDB id
4khq
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
ProMotif
10 sheets
12 beta hairpins
13 beta bulges
33 strands
38 helices
50 helix-helix interacs
51 beta turns
6 gamma turns
  
Chain (899 residues)

UniProt code: Q38087 (DPOL_BPR69)   [Pfam]

structural classification (6 domains) :
Domain Links CATH no.   Class Architecture
1 3.30.342.10 = Alpha Beta 2-Layer Sandwich
2 3.30.420.10 = Alpha Beta 2-Layer Sandwich
3 Unassigned = - -
4 Unassigned = - -
5 Unassigned = - -
6 3.40.1820.10 = Alpha Beta 3-Layer(aba) Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to ligand     to DNA/RNA     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2  BC3

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


Domain 5
Topology diagram


Hera


Domain 6
Topology diagram


Hera


  Related protein sequences in the PDB
  
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