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PDBsum entry 4jv0

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Pore analysis for: 4jv0 calculated with MOLE 2.0 PDB id
4jv0
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.22 2.22 25.7 0.60 0.28 12.5 88 2 0 1 4 0 0 0  DT 4 B KAG 5 B DG 6 B DT 30 C DC 31 C
2 1.71 1.90 41.9 -1.20 -0.41 11.3 84 4 0 2 4 1 0 0  DTP 1000 A DT 4 B KAG 5 B DA 7 B DC 31 C DC 32 C
3 2.55 2.58 43.7 -0.03 0.30 19.9 91 5 0 3 4 0 0 0  DT 4 B KAG 5 B DG 6 B DA 7 B DA 8 B DT 9 B DC 10
B DG 22 C DG 23 C DA 24 C DG 27 C DA 28 C DT 30 C
DC 31 C
4 2.26 2.26 53.8 -1.67 -0.45 18.0 85 6 0 3 2 2 0 0  DG 6 B DA 7 B DA 8 B DT 9 B DC 10 B DG 22 C DG 23
C DA 24 C DC 31 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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