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PDBsum entry 4jsf

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4jsf calculated with MOLE 2.0 PDB id
4jsf
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.38 16.7 -1.85 -0.62 17.2 76 1 2 1 0 1 1 0  
2 1.29 1.37 19.0 -1.67 -0.77 18.9 79 1 3 1 0 1 0 0  
3 1.26 1.42 23.0 -1.78 -0.39 19.3 73 2 1 2 2 2 1 0  
4 1.28 1.41 25.4 -1.82 -0.58 20.6 75 2 2 2 2 2 0 0  
5 1.70 3.29 20.2 -1.03 -0.26 16.1 79 1 3 2 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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