PDBsum entry 4jps Go to PDB code:  Pore analysis for: 4jps calculated with MOLE 2.0 PDB id 4jps Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.80 25.6 -1.20 -0.15 24.4 78 4 4 2 3 1 1 0   2 2.57 3.88 29.1 -2.16 -0.51 23.5 82 3 2 2 2 2 0 0   3 1.56 1.67 39.0 -2.50 -0.48 26.8 83 7 4 5 2 3 0 0   4 1.50 3.29 39.5 -2.98 -0.75 37.4 81 9 6 3 0 1 0 0   5 1.53 1.68 42.3 -1.49 -0.58 15.3 82 4 3 5 4 1 3 0   6 2.82 3.08 46.4 -1.98 -0.59 25.3 84 8 5 2 3 1 0 0   7 2.64 3.92 49.3 -2.41 -0.47 28.7 81 8 5 3 2 1 0 0   8 2.88 4.48 55.4 -1.98 -0.36 20.5 89 7 5 9 3 1 2 1  1LT 1102 A 9 1.44 1.63 60.3 -1.41 -0.39 20.4 79 6 7 5 2 4 2 1   10 1.86 3.67 62.4 -1.34 -0.30 11.8 86 5 3 9 5 2 2 0   11 1.45 1.46 66.4 -1.58 -0.44 15.7 74 9 5 5 1 4 5 2   12 2.36 2.67 70.2 -3.16 -0.61 42.5 80 11 13 1 1 0 2 0   13 1.43 1.63 70.9 -1.68 -0.42 22.0 79 9 9 4 2 3 2 1   14 1.61 1.81 72.5 -1.51 -0.31 17.4 80 6 5 5 5 1 3 1   15 1.60 1.90 76.4 -2.76 -0.54 29.7 80 13 13 7 0 1 4 1   16 1.57 2.77 81.4 -2.67 -0.63 27.8 83 10 10 8 3 1 1 0   17 2.36 2.62 81.5 -2.46 -0.53 33.9 87 12 13 4 4 0 2 0  1LT 1102 A 18 2.35 2.68 81.8 -2.95 -0.59 39.8 81 12 14 0 2 0 2 0   19 1.43 1.64 82.6 -1.79 -0.42 23.3 78 10 9 7 2 4 2 1   20 1.42 1.40 84.8 -1.41 -0.39 15.9 82 9 6 8 4 4 6 2  1LT 1102 A 21 1.49 1.49 86.9 -2.61 -0.60 25.7 87 9 8 9 2 2 0 0   22 1.60 1.90 87.6 -2.59 -0.49 29.5 82 12 15 6 3 1 5 1   23 1.56 3.42 96.9 -2.61 -0.65 34.8 87 14 16 6 3 0 2 0  1LT 1102 A 24 1.50 3.27 97.2 -2.95 -0.70 38.9 82 14 16 2 1 0 2 0   25 1.56 1.66 103.0 -2.63 -0.59 29.9 82 14 18 8 2 1 5 1   26 1.41 1.71 107.8 -1.51 -0.52 15.3 78 9 6 7 4 4 7 2   27 1.54 1.66 128.4 -1.39 -0.24 21.8 77 9 8 4 9 4 3 2   28 1.45 1.47 129.6 -1.66 -0.52 18.8 78 11 10 7 4 5 8 1   29 1.21 1.30 150.4 -2.55 -0.69 29.5 85 20 18 11 6 1 0 0   30 1.42 2.76 208.1 -2.11 -0.50 27.7 83 21 20 9 8 2 5 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.