PDBsum entry 4jps Go to PDB code:  Tunnel analysis for: 4jps calculated with MOLE 2.0 PDB id 4jps Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 35.9 -1.54 -0.24 24.8 83 4 5 4 4 1 1 1   2 1.33 1.33 52.6 -1.83 -0.33 19.1 86 5 3 10 4 1 3 0   3 1.33 1.33 65.9 -1.47 -0.17 18.4 83 7 4 9 8 4 1 0   4 1.36 1.35 68.8 -1.15 -0.30 13.9 79 6 4 7 5 4 5 1   5 1.36 1.35 76.7 -1.83 -0.41 23.8 86 8 7 8 5 2 1 0   6 1.34 1.34 78.6 -1.81 -0.45 21.9 86 8 6 10 5 1 1 1   7 1.36 1.35 79.4 -1.67 -0.33 21.2 84 7 7 11 7 3 4 0   8 1.31 2.78 15.1 0.23 0.13 6.8 88 0 1 2 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.