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PDBsum entry 4jmg

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Tunnel analysis for: 4jmg calculated with MOLE 2.0 PDB id
4jmg
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.23 15.7 0.55 -0.09 5.5 76 1 0 0 4 2 0 0  
2 1.14 1.23 19.9 0.52 -0.16 4.4 79 1 0 0 4 2 0 0  
3 1.15 1.25 22.3 0.19 -0.10 7.5 76 1 0 0 4 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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