PDBsum entry 4jav Go to PDB code:  Pore analysis for: 4jav calculated with MOLE 2.0 PDB id 4jav Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.89 25.5 -0.59 -0.04 5.2 88 1 1 5 2 1 0 0   2 3.21 3.93 27.6 -2.27 -0.48 18.5 84 3 2 5 2 1 1 0  SO4 503 B 3 2.20 2.54 29.4 -1.45 0.00 25.9 83 5 3 1 2 1 0 0   4 2.59 3.93 30.5 -2.45 -0.52 25.5 85 3 4 4 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.