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PDBsum entry 4jav
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Tunnel analysis for: 4jav calculated with  MOLE 2.0
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PDB id
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4jav
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.43 |
1.44 |
25.7 |
1.00 |
0.29 |
6.2 |
89 |
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0 |
1 |
3 |
7 |
2 |
1 |
0 |
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ADP 504 A
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2 |
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1.20 |
1.20 |
29.2 |
-1.01 |
-0.42 |
14.2 |
84 |
2 |
1 |
3 |
3 |
2 |
1 |
0 |
ADP 504 A
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3 |
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1.39 |
1.43 |
34.5 |
-0.87 |
-0.06 |
19.6 |
86 |
3 |
3 |
1 |
5 |
2 |
0 |
0 |
ADP 504 A
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4 |
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1.44 |
1.53 |
35.1 |
-0.71 |
-0.05 |
12.4 |
82 |
1 |
3 |
3 |
5 |
3 |
1 |
0 |
SO4 502 A MG 503 A ADP 504 A
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5 |
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1.22 |
2.89 |
21.5 |
0.43 |
0.24 |
7.8 |
81 |
1 |
0 |
2 |
4 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program