PDBsum entry 4j99 Go to PDB code:  Tunnel analysis for: 4j99 calculated with MOLE 2.0 PDB id 4j99 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 25.2 -2.00 -0.37 28.8 76 2 5 1 4 1 1 0  ACP 802 C 2 1.27 1.27 27.8 -2.19 -0.39 28.8 73 3 5 1 4 2 2 0   3 1.25 1.25 21.5 -2.13 -0.40 31.4 74 3 4 1 4 1 1 0   4 1.24 1.24 33.2 -1.96 -0.47 26.4 76 2 5 1 4 1 1 0  ACP 802 B 5 1.36 1.36 16.7 -0.45 -0.51 13.9 68 1 3 0 2 0 0 0   6 1.71 1.87 17.1 -0.02 0.07 8.4 74 2 0 1 2 2 0 0   7 1.06 1.63 16.8 -0.17 0.14 5.3 61 2 0 0 2 3 1 0   8 1.20 1.57 16.8 -0.77 -0.04 18.7 77 1 2 0 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.