PDBsum entry 4j8v Go to PDB code:  Pore analysis for: 4j8v calculated with MOLE 2.0 PDB id 4j8v Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.72 2.72 29.8 -1.22 -0.76 10.3 90 2 0 4 1 0 0 0  DC -24 I DT -21 I DC -20 I DT 49 I DG - 55 J DT 16 J DT 17 J DT 19 J DG 20 J 2 3.59 3.80 30.7 -1.62 -0.65 19.8 92 4 1 3 1 0 0 0  DG -55 I DT 19 I DC -24 J DG -14 J DG 60 J DG 61 J 3 2.25 2.25 33.1 -0.90 -0.64 9.4 87 4 0 4 1 0 0 0  DG -55 I DT 17 I DT 19 I DG 20 I DC -24 J DT - 21 J DC -20 J DA -19 J 4 3.14 3.14 38.9 -2.00 -0.60 23.7 79 6 1 0 1 1 0 0  DA -44 I DA -43 I DG -42 I DT -41 I DT - 39 I DA 39 I DC 40 I DT -36 J DT -35 J DG - 34 J DA 35 J DA 36 J DA 37 J DT 38 J DA 39 J DC 40 J 5 2.75 3.19 40.7 -2.17 -0.33 29.2 84 5 1 4 2 1 0 0  RU7 1102 D DT -35 I DG -34 I DC - 24 I DT 49 I DA 50 I DA -44 J DA 28 J 6 2.36 2.50 45.7 -1.98 -0.65 21.9 88 5 1 3 1 0 0 0  DT -65 I DC -64 I DG - 55 I DT 19 I DA 59 J DG 60 J DT 68 J DT 69 J 7 2.48 2.87 49.0 -2.38 -0.58 29.2 78 6 2 0 1 1 0 0  DA -44 I DA -43 I DG -42 I DT -41 I DT -39 I DT - 35 I DG -34 I DA 39 I DC 40 I DA 41 I DT - 35 J DG - 34 J DA 36 J DA 37 J DT 38 J DA 39 J DC 40 J 8 3.66 3.66 49.2 -1.83 -0.68 19.9 91 5 1 5 1 0 0 0  DC -63 I DA -62 I DC -61 I DC -60 I DG - 55 I DT 19 I DC -24 J DC 58 J DA 59 J DG 60 J 9 2.88 3.15 57.6 -1.80 -0.62 19.0 92 5 0 5 2 0 0 0  DA -32 I DA -31 I DC - 24 I DT 49 I DA 50 I DA 28 J DG 29 J DA 35 J DA 36 J 10 2.40 2.89 60.5 -1.93 -0.57 23.6 88 7 2 5 2 1 0 0  RU7 203 H DA -44 I DT -35 I DG - 34 I DA 28 I DA 39 I DC 40 I DA 41 I DT -35 J DG - 34 J DC -24 J DA 39 J 11 3.14 3.14 61.0 -2.29 -0.41 27.3 87 10 0 5 3 2 0 0  RU7 203 H DA -44 I DA -43 I DG -42 I DT -41 I DT - 39 I DA 28 I DG -34 J DC - 24 J DA 35 J DA 36 J DA 37 J DT 38 J DC 40 J 12 1.87 3.44 69.4 -2.65 -0.43 32.4 75 14 5 3 2 3 1 0  RU7 1102 D DT -35 I DG -34 I DA 41 I DA -44 J 13 1.68 1.68 82.1 -1.24 -0.74 14.8 87 5 2 1 1 0 0 0  DA -46 I DA -45 I DA -44 I DA -43 I DG -42 I DT - 41 I DG -40 I DT -39 I DT -35 I DG - 34 I DA 39 I DC 40 I DA 41 I DT -35 J DG - 34 J DA 39 J DC 42 J DT 43 J DT 44 J DT 45 J DT 46 J DG 47 J 14 2.16 3.95 82.5 -2.52 -0.44 27.7 81 13 4 7 2 4 1 0  RU7 203 H DC -24 J 15 2.12 2.12 90.0 -1.50 -0.44 23.2 75 7 1 0 3 0 1 0  DA -66 I DT -65 I DG -2 I DA - 1 I DA 0 I DT 1 I DT 6 I DG 7 I DC 10 I DG - 14 J DC -13 J DA -12 J DT -11 J DG -10 J DT - 3 J DG -2 J DA -1 J DT 0 J 16 2.18 3.90 103.1 -2.39 -0.53 27.4 78 16 5 4 0 3 1 0  RU7 203 H DA -44 I DA 39 I DC 40 I DT -36 J DT - 35 J DG -34 J DA 39 J DC 40 J 17 1.62 1.62 122.9 -2.17 -0.49 25.0 77 15 4 3 2 3 1 0  RU7 203 H DA -46 I DA -45 I DA -44 I DA -43 I DG - 42 I DT -41 I DG -40 I DT - 39 I DC 42 J DT 43 J DT 44 J DT 45 J DT 46 J DG 47 J 18 2.20 2.20 145.6 -1.85 -0.67 19.5 84 10 2 6 0 0 2 0  DC -24 I DG -5 I DC -4 I DT -3 I DG -2 I DA - 1 I DA 0 I DT 1 I DT 49 I DA 50 I DA 59 I DG 60 I DT 68 I DT 69 I DG 70 I DC -64 J DC -63 J DG - 55 J DT -3 J DG -2 J DA - 1 J DT 0 J DT 1 J DC 2 J DT 19 J 19 2.12 3.35 147.3 -2.30 -0.54 26.3 78 15 7 5 7 1 2 0  DG -2 I DA -1 I DA 0 I DT 1 I DT -3 J DG -2 J DA - 1 J DT 0 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.