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PDBsum entry 4j70

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4j70 calculated with MOLE 2.0 PDB id
4j70
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.76 2.03 86.0 -0.68 -0.29 15.8 86 9 5 6 10 2 0 0  
2 1.65 1.85 105.3 -2.56 -0.43 27.3 76 11 8 5 2 5 0 0  
3 2.11 3.69 104.9 -2.39 -0.41 27.9 78 12 8 6 4 6 0 0  
4 1.64 1.87 112.6 -1.63 -0.28 21.4 78 13 9 7 5 6 1 1  
5 1.73 1.79 120.0 -2.82 -0.58 32.6 79 18 11 7 3 3 0 0  
6 1.53 1.74 119.9 -1.77 -0.32 22.2 80 10 7 6 7 6 1 0  
7 1.69 1.66 121.4 -1.83 -0.35 27.7 82 11 11 4 6 3 2 0  
8 1.50 2.35 124.5 -2.18 -0.39 25.3 78 11 10 7 5 4 1 0  
9 1.81 2.47 140.6 -1.60 -0.23 20.1 73 14 7 9 8 11 2 0  
10 1.70 3.87 145.9 -2.45 -0.44 30.5 79 16 17 8 6 7 1 0  
11 1.79 3.84 165.5 -2.33 -0.44 30.9 81 21 18 8 7 5 1 0  
12 1.62 1.83 173.4 -2.48 -0.48 31.1 80 23 19 9 5 4 1 0  
13 1.73 1.85 171.5 -2.18 -0.37 22.1 80 15 6 12 7 8 1 1  
14 1.38 1.32 176.8 -1.59 -0.32 21.3 82 15 12 11 14 6 1 0  
15 1.23 1.48 181.6 -1.95 -0.46 26.4 83 20 14 9 10 5 1 0  
16 1.54 2.35 186.0 -2.59 -0.44 25.6 80 13 8 12 7 7 1 0  
17 1.22 1.21 191.7 -2.09 -0.39 26.9 81 20 21 12 12 6 1 0  
18 1.75 1.72 188.5 -2.82 -0.52 28.2 80 20 9 11 4 6 0 0  
19 1.71 1.78 197.0 -2.65 -0.50 26.3 81 18 10 12 5 7 0 0  
20 1.94 1.95 207.0 -2.55 -0.52 24.8 83 20 12 12 4 4 0 0  
21 1.79 1.80 210.0 -2.50 -0.50 25.7 82 21 12 12 6 6 0 0  
22 1.54 1.92 213.8 -2.27 -0.43 22.9 82 19 8 13 8 7 1 0  
23 1.21 1.27 216.3 -2.57 -0.49 25.3 80 17 9 13 8 10 1 0  
24 1.34 1.38 232.2 -2.17 -0.42 23.3 84 20 14 16 12 5 0 0  
25 1.75 1.81 248.7 -2.23 -0.42 26.0 81 27 17 15 10 7 2 1  
26 1.25 1.51 253.0 -2.21 -0.45 25.4 83 22 12 14 12 8 1 0  
27 1.50 1.64 248.2 -2.16 -0.44 23.5 83 24 11 14 9 5 1 0  
28 1.47 2.29 263.3 -2.51 -0.47 28.4 81 25 19 15 10 6 2 0  
29 1.61 1.64 265.8 -2.69 -0.52 30.4 81 31 20 14 7 5 1 0  
30 1.44 1.78 272.2 -2.58 -0.49 29.4 82 29 20 14 7 5 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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