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PDBsum entry 4j6k

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Pore analysis for: 4j6k calculated with MOLE 2.0 PDB id
4j6k
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.48 31.0 -0.56 -0.23 17.3 78 4 3 2 3 1 0 0  SO4 301 H
2 1.35 1.47 47.2 -1.80 -0.24 17.2 77 3 6 5 3 3 0 1  
3 1.64 1.64 52.3 -1.53 -0.20 22.5 80 6 1 3 2 2 1 0  
4 1.28 1.38 69.4 -1.43 -0.42 20.5 79 8 7 4 6 2 0 1  
5 1.23 1.42 69.4 -1.71 -0.48 22.3 88 6 3 8 3 1 0 1  
6 1.20 1.47 78.0 -1.09 -0.29 21.2 80 8 4 2 4 2 0 0  SO4 301 H
7 1.39 1.69 95.8 -1.95 -0.40 20.6 82 9 7 8 3 3 0 1  
8 2.09 2.25 97.3 -1.77 -0.37 22.3 81 12 5 5 7 4 0 2  
9 1.33 2.27 101.5 -1.76 -0.36 22.2 84 11 3 8 5 3 0 1  
10 1.26 1.32 138.1 -1.76 -0.39 20.8 80 17 8 9 8 5 0 2  
11 1.46 1.50 136.7 -1.33 -0.23 18.2 80 9 10 10 11 6 0 2  
12 1.31 1.58 137.1 -1.88 -0.34 20.6 79 9 7 7 4 4 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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