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PDBsum entry 4j4x

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4j4x calculated with MOLE 2.0 PDB id
4j4x
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.67 4.67 33.1 -1.43 -0.46 20.4 94 1 3 4 4 0 0 0  
2 2.87 3.24 36.4 -1.52 -0.50 15.3 91 4 1 2 2 1 0 0  
3 3.63 3.79 36.6 -1.69 -0.59 22.0 86 3 3 1 3 0 0 0  
4 2.43 2.99 44.6 -2.13 -0.63 19.0 84 5 2 3 1 1 2 0  
5 2.22 2.36 51.3 -1.27 -0.38 13.2 90 2 2 6 4 1 2 0  
6 2.25 2.34 55.0 -0.88 -0.21 13.8 80 5 2 3 3 3 3 0  
7 2.17 2.94 56.3 -1.86 -0.52 21.1 85 7 2 3 4 1 1 0  
8 2.44 3.00 76.2 -2.01 -0.60 21.4 90 5 5 4 4 0 2 0  
9 2.67 2.88 80.0 -2.18 -0.58 19.4 88 7 3 7 2 0 3 0  
10 2.45 3.43 94.8 -1.78 -0.33 15.9 84 7 1 8 5 4 5 0  
11 1.48 2.32 102.9 -1.83 -0.45 19.9 89 5 6 5 5 0 2 0  
12 2.27 2.34 103.4 -1.87 -0.36 18.0 82 10 2 8 4 4 6 0  
13 2.27 2.32 144.2 -1.82 -0.38 17.4 83 12 3 10 5 4 7 0  
14 1.61 2.39 146.1 -2.01 -0.41 20.0 82 9 5 7 6 4 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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