PDBsum entry 4j4u Go to PDB code:  Tunnel analysis for: 4j4u calculated with MOLE 2.0 PDB id 4j4u Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.25 26.1 -1.56 -0.32 10.2 84 4 0 4 4 1 2 0   2 1.19 1.25 56.5 -0.56 -0.24 10.6 89 4 2 7 7 2 2 0   3 1.21 1.26 61.2 -1.10 -0.25 14.6 83 5 3 5 6 4 2 0   4 1.25 1.31 18.7 0.29 -0.01 12.7 75 3 1 0 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.