PDBsum entry 4j2e Go to PDB code:  Pore analysis for: 4j2e calculated with MOLE 2.0 PDB id 4j2e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.38 26.5 -0.66 0.23 16.1 79 3 2 1 6 2 1 0   2 1.95 1.95 36.8 -1.76 -0.24 28.8 80 7 4 2 5 1 0 0  ATP 1001 A CA 1005 A 3 2.09 2.09 52.8 -0.69 -0.29 15.2 80 2 3 1 3 1 0 0  DT 112 P DT 1 T DC 2 T DG 3 T DT 4 T DC 5 T DT 6 T 4 2.00 2.04 57.9 0.18 0.03 5.6 80 2 0 4 5 3 0 0  DT 112 P DT 113 P DA 114 P DT 1 T DC 2 T DG 3 T DT 4 T DC 5 T DT 6 T 5 1.96 1.96 67.4 -0.68 -0.07 19.2 79 5 4 1 6 2 0 0  ATP 1001 A CA 1005 A DT 112 P DT 113 P DA 114 P DG 115 P DT 1 T DC 2 T DG 3 T DT 4 T DC 5 T DT 6 T 6 1.95 1.95 68.1 -1.39 -0.28 23.6 79 8 7 1 5 2 0 0  ATP 1001 A CA 1005 A DT 113 P DA 114 P DG 115 P DT 1 T 7 2.58 4.22 82.5 -1.59 -0.31 21.0 82 8 6 7 2 3 1 0   8 1.44 1.53 92.6 -0.96 -0.42 13.3 81 5 2 4 2 3 1 0  DG 103 P DC 104 P DT 109 P DG 110 P DC 111 P DT 112 P DC 2 T DG 3 T DT 4 T DC 5 T DT 6 T DA 11 T DG 12 T DT 13 T 9 1.41 1.52 100.5 -1.15 -0.57 13.8 85 7 1 3 2 1 1 0  DG 103 P DC 104 P DT 109 P DG 110 P DC 111 P DT 112 P DT 1 T DT 4 T DC 5 T DT 6 T DA 11 T DG 12 T DT 13 T 10 1.41 1.54 113.2 -0.64 -0.30 9.7 85 7 0 7 4 3 1 0  DG 103 P DC 104 P DT 109 P DG 110 P DC 111 P DT 112 P DT 113 P DA 114 P DT 1 T DT 4 T DC 5 T DT 6 T DA 11 T DG 12 T DT 13 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.