PDBsum entry 4j1y Go to PDB code:  Pore analysis for: 4j1y calculated with MOLE 2.0 PDB id 4j1y Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.00 2.22 30.4 -1.66 -0.64 17.0 89 4 2 4 3 2 0 0   2 2.13 2.17 64.3 -1.76 -0.46 19.5 83 4 6 6 5 4 2 0   3 1.41 2.75 80.2 0.25 0.11 10.0 74 3 2 2 8 4 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.