PDBsum entry 4j0w Go to PDB code:  Tunnel analysis for: 4j0w calculated with MOLE 2.0 PDB id 4j0w Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.43 28.8 -0.88 -0.10 19.9 75 4 2 2 3 1 0 3   2 1.35 1.40 29.0 -1.19 -0.27 21.9 83 3 1 1 5 0 1 2   3 1.36 1.42 32.5 -0.54 -0.23 17.0 83 3 1 1 7 0 0 2   4 1.33 1.40 41.6 -1.09 -0.24 21.9 86 3 2 3 6 0 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.