 |
PDBsum entry 4ih8
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4ih8 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4ih8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
4.19 |
4.19 |
26.8 |
0.01 |
0.31 |
12.4 |
86 |
 |
3 |
4 |
1 |
5 |
2 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.36 |
1.36 |
28.5 |
-1.56 |
-0.58 |
16.7 |
87 |
3 |
3 |
3 |
1 |
2 |
0 |
0 |
|
 |
3 |
 |
1.37 |
1.37 |
30.5 |
-0.06 |
0.06 |
11.8 |
86 |
2 |
2 |
2 |
5 |
3 |
0 |
0 |
|
 |
4 |
 |
1.49 |
1.80 |
62.3 |
-1.49 |
-0.48 |
23.9 |
85 |
7 |
6 |
4 |
6 |
0 |
0 |
0 |
|
 |
5 |
 |
1.36 |
1.34 |
68.1 |
-1.17 |
-0.46 |
18.9 |
86 |
7 |
4 |
4 |
5 |
1 |
0 |
0 |
|
 |
6 |
 |
1.48 |
1.82 |
69.2 |
-0.34 |
-0.15 |
16.4 |
83 |
5 |
5 |
2 |
9 |
2 |
0 |
0 |
|
 |
7 |
 |
1.67 |
1.80 |
70.4 |
-0.17 |
-0.10 |
16.2 |
80 |
8 |
5 |
2 |
14 |
0 |
0 |
0 |
B43 601 A
|
 |
8 |
 |
1.51 |
1.81 |
73.1 |
-0.19 |
-0.16 |
15.0 |
80 |
7 |
5 |
2 |
14 |
0 |
0 |
0 |
B43 601 A
|
 |
9 |
 |
1.25 |
1.25 |
74.2 |
-1.38 |
-0.59 |
18.2 |
90 |
6 |
5 |
5 |
4 |
0 |
0 |
0 |
|
 |
10 |
 |
1.23 |
1.23 |
75.2 |
-0.85 |
-0.25 |
17.9 |
88 |
4 |
6 |
4 |
8 |
2 |
0 |
0 |
|
 |
11 |
 |
1.23 |
1.24 |
78.0 |
-1.37 |
-0.56 |
17.9 |
90 |
5 |
5 |
5 |
4 |
1 |
0 |
0 |
|
 |
12 |
 |
1.61 |
1.80 |
79.3 |
0.69 |
0.17 |
10.0 |
78 |
7 |
4 |
0 |
17 |
2 |
0 |
0 |
B43 601 A
|
 |
13 |
 |
1.22 |
1.22 |
81.3 |
-0.18 |
-0.22 |
13.0 |
83 |
6 |
5 |
3 |
13 |
0 |
0 |
0 |
B43 601 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |