 |
PDBsum entry 4i4e
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4i4e calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4i4e
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
5 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.03 |
1.64 |
17.4 |
-0.87 |
-0.34 |
18.7 |
83 |
|
2 |
3 |
1 |
4 |
0 |
0 |
0 |
|
1BQ 1000 A
|
 |
|
2 |
 |
1.03 |
1.64 |
32.5 |
0.19 |
-0.06 |
13.3 |
85 |
1 |
3 |
1 |
8 |
0 |
0 |
0 |
1BQ 1000 A
|
|
3 |
 |
1.28 |
1.28 |
19.4 |
0.58 |
0.29 |
8.6 |
75 |
2 |
1 |
0 |
3 |
2 |
1 |
0 |
|
 |
4 |
 |
1.30 |
1.30 |
21.3 |
0.34 |
0.35 |
10.0 |
77 |
2 |
1 |
0 |
4 |
2 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program