 |
PDBsum entry 4hs8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4hs8 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4hs8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
16 tunnels,
coloured by tunnel radius |
|
20 tunnels,
coloured by
tunnel radius
|
20 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.05 |
5.19 |
15.3 |
-2.03 |
-0.82 |
14.7 |
85 |
|
2 |
1 |
3 |
0 |
0 |
1 |
0 |
|
|
 |
|
2 |
 |
1.18 |
1.47 |
15.5 |
-0.47 |
-0.37 |
6.9 |
84 |
2 |
0 |
3 |
1 |
1 |
1 |
0 |
|
|
3 |
 |
2.58 |
2.58 |
18.7 |
-1.59 |
-0.84 |
18.6 |
92 |
2 |
2 |
2 |
0 |
0 |
1 |
0 |
|
|
4 |
 |
2.28 |
2.31 |
20.8 |
-0.93 |
-0.70 |
6.8 |
78 |
0 |
1 |
2 |
1 |
0 |
3 |
0 |
|
|
5 |
 |
3.16 |
3.16 |
21.9 |
-1.42 |
-0.58 |
14.1 |
81 |
2 |
1 |
0 |
1 |
0 |
2 |
0 |
|
|
6 |
 |
1.18 |
1.47 |
29.5 |
-0.95 |
-0.66 |
11.6 |
89 |
1 |
2 |
4 |
1 |
1 |
1 |
0 |
|
|
7 |
 |
2.26 |
2.31 |
30.3 |
-1.69 |
-0.73 |
14.5 |
78 |
2 |
2 |
3 |
0 |
0 |
2 |
0 |
|
|
8 |
 |
2.20 |
3.36 |
32.2 |
-0.80 |
-0.50 |
9.8 |
73 |
1 |
1 |
0 |
3 |
1 |
3 |
0 |
|
|
9 |
 |
2.27 |
2.31 |
32.7 |
-0.49 |
-0.44 |
7.2 |
80 |
1 |
1 |
3 |
2 |
0 |
2 |
0 |
|
|
10 |
 |
1.17 |
1.47 |
35.4 |
-0.92 |
-0.55 |
10.0 |
84 |
1 |
2 |
3 |
2 |
1 |
2 |
0 |
|
|
11 |
 |
1.18 |
1.47 |
46.2 |
-0.76 |
-0.52 |
9.7 |
76 |
0 |
3 |
3 |
4 |
2 |
4 |
0 |
|
|
12 |
|
1.29 |
1.30 |
16.6 |
-0.44 |
-0.43 |
8.2 |
76 |
2 |
0 |
2 |
0 |
2 |
1 |
0 |
|
|
13 |
|
1.21 |
1.48 |
16.6 |
-0.58 |
-0.06 |
11.8 |
69 |
1 |
2 |
1 |
1 |
2 |
2 |
0 |
|
|
14 |
|
1.21 |
1.21 |
17.4 |
-0.43 |
-0.36 |
11.6 |
73 |
1 |
2 |
2 |
3 |
2 |
1 |
0 |
|
|
15 |
|
1.19 |
1.83 |
17.8 |
0.21 |
-0.18 |
1.8 |
77 |
0 |
0 |
2 |
2 |
2 |
3 |
0 |
|
|
16 |
|
1.21 |
1.54 |
18.7 |
-0.47 |
-0.44 |
11.4 |
79 |
1 |
2 |
1 |
3 |
1 |
1 |
0 |
|
|
17 |
|
1.19 |
1.20 |
25.5 |
-0.40 |
-0.34 |
12.9 |
66 |
2 |
3 |
1 |
3 |
3 |
0 |
0 |
|
|
18 |
|
1.21 |
1.21 |
25.8 |
-0.34 |
-0.30 |
10.6 |
62 |
2 |
2 |
1 |
2 |
3 |
1 |
1 |
|
|
19 |
|
1.20 |
1.20 |
26.8 |
-0.43 |
-0.38 |
13.2 |
70 |
2 |
3 |
0 |
3 |
2 |
0 |
0 |
|
 |
20 |
|
1.20 |
1.20 |
27.0 |
-0.29 |
-0.35 |
10.2 |
66 |
2 |
2 |
0 |
2 |
2 |
1 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program