 |
PDBsum entry 4hoq
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4hoq calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4hoq
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 tunnels,
coloured by tunnel radius |
|
20 tunnels,
coloured by
tunnel radius
|
20 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.22 |
4.11 |
17.0 |
-0.80 |
0.37 |
11.8 |
78 |
|
2 |
1 |
3 |
2 |
2 |
0 |
0 |
|
|
 |
|
2 |
 |
1.25 |
3.99 |
20.0 |
-0.50 |
0.46 |
11.1 |
74 |
3 |
1 |
2 |
3 |
4 |
0 |
0 |
|
|
3 |
 |
2.26 |
3.31 |
24.4 |
-1.59 |
0.05 |
19.9 |
67 |
3 |
3 |
1 |
1 |
6 |
1 |
0 |
|
|
4 |
 |
1.92 |
2.73 |
26.0 |
-1.55 |
0.01 |
21.1 |
63 |
3 |
3 |
0 |
1 |
7 |
1 |
0 |
|
|
5 |
 |
1.29 |
3.77 |
26.3 |
-1.44 |
0.08 |
19.6 |
67 |
3 |
3 |
0 |
2 |
7 |
1 |
0 |
|
|
6 |
 |
1.20 |
2.55 |
27.7 |
-1.53 |
-0.39 |
19.6 |
72 |
3 |
4 |
2 |
1 |
7 |
0 |
0 |
|
|
7 |
 |
2.28 |
3.30 |
28.9 |
-1.68 |
0.02 |
25.6 |
70 |
6 |
3 |
3 |
2 |
6 |
0 |
0 |
|
|
8 |
 |
1.19 |
2.55 |
29.3 |
-1.54 |
-0.36 |
21.0 |
69 |
3 |
4 |
1 |
1 |
8 |
0 |
0 |
|
|
9 |
 |
1.20 |
2.56 |
29.6 |
-1.35 |
-0.29 |
19.5 |
72 |
3 |
4 |
1 |
2 |
8 |
0 |
0 |
|
|
10 |
 |
1.94 |
2.77 |
30.5 |
-1.68 |
-0.02 |
26.3 |
67 |
6 |
3 |
2 |
2 |
7 |
0 |
0 |
|
|
11 |
 |
1.30 |
3.78 |
30.9 |
-1.53 |
0.10 |
24.9 |
70 |
6 |
3 |
2 |
3 |
7 |
0 |
0 |
|
|
12 |
|
1.28 |
1.49 |
32.0 |
-1.00 |
-0.21 |
17.8 |
80 |
3 |
3 |
3 |
3 |
5 |
0 |
0 |
MSE 336 A
|
|
13 |
|
1.60 |
1.83 |
33.1 |
-1.98 |
-0.42 |
25.4 |
74 |
4 |
5 |
1 |
1 |
5 |
0 |
0 |
|
|
14 |
|
1.28 |
1.49 |
33.6 |
-0.92 |
-0.25 |
18.0 |
77 |
3 |
3 |
2 |
3 |
6 |
0 |
0 |
MSE 336 A
|
|
15 |
|
1.30 |
1.50 |
33.9 |
-0.86 |
-0.15 |
16.9 |
79 |
3 |
3 |
2 |
4 |
6 |
0 |
0 |
MSE 336 A
|
|
16 |
|
1.27 |
1.49 |
34.1 |
-1.13 |
-0.27 |
16.4 |
74 |
3 |
2 |
2 |
3 |
5 |
0 |
0 |
|
|
17 |
|
1.60 |
1.83 |
34.7 |
-1.98 |
-0.48 |
26.4 |
70 |
4 |
5 |
0 |
1 |
6 |
0 |
0 |
|
|
18 |
|
1.30 |
3.78 |
35.1 |
-1.73 |
-0.34 |
23.6 |
73 |
4 |
5 |
0 |
2 |
6 |
0 |
0 |
|
|
19 |
|
1.27 |
1.49 |
35.7 |
-0.94 |
-0.33 |
15.7 |
71 |
3 |
2 |
1 |
3 |
6 |
0 |
0 |
|
 |
20 |
|
1.28 |
1.50 |
36.0 |
-0.96 |
-0.21 |
16.2 |
74 |
3 |
2 |
1 |
4 |
6 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program