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PDBsum entry 4gz8

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protein ligands metals Protein-protein interface(s) links
Signaling protein PDB id
4gz8

 

 

 

 

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Contents
Protein chains
557 a.a.
Ligands
NAG-NAG-BMA-MAN ×2
NAG-NAG
ACT ×2
NAG
Metals
_CA ×5
PDB id:
4gz8
Name: Signaling protein
Title: Mouse semaphorin 3a, domains sema-psi-ig
Structure: Semaphorin-3a. Chain: a, b. Fragment: unp residues 21-675. Synonym: semaphorin iii, sema iii, semaphorin-d, sema d. Engineered: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: sema3a, semad, semd. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek293
Resolution:
3.30Å     R-factor:   0.216     R-free:   0.265
Authors: B.J.C.Janssen,T.Malinauskas,C.Siebold,E.Y.Jones
Key ref: B.J.Janssen et al. (2012). Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex. Nat Struct Biol, 19, 1293-1299. PubMed id: 23104057
Date:
06-Sep-12     Release date:   17-Oct-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
O08665  (SEM3A_MOUSE) -  Semaphorin-3A from Mus musculus
Seq:
Struc:
 
Seq:
Struc:
772 a.a.
557 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 28 residue positions (black crosses)

 

 
Nat Struct Biol 19:1293-1299 (2012)
PubMed id: 23104057  
 
 
Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
B.J.Janssen, T.Malinauskas, G.A.Weir, M.Z.Cader, C.Siebold, E.Y.Jones.
 
  ABSTRACT  
 
No abstract given.

 

 

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