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PDBsum entry 4gz5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4gz5 calculated with MOLE 2.0 PDB id
4gz5
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.89 2.35 29.4 -2.48 -0.66 19.2 87 5 2 5 2 0 0 0  
2 1.73 1.81 42.0 -1.88 -0.53 12.1 80 6 2 5 3 1 1 0  
3 1.77 1.84 42.8 -1.47 -0.38 15.7 82 5 1 4 6 1 1 0  
4 1.23 1.39 84.4 -1.18 -0.37 12.2 78 2 3 6 6 1 3 2  SO4 1503 A SO4 1505 A SO4 1502 B
5 3.21 3.21 102.3 -1.89 -0.50 22.1 85 9 9 14 6 4 0 0  SO4 1502 C
6 3.37 3.37 104.0 -1.32 -0.34 18.1 81 11 6 9 8 1 2 0  SO4 1503 C
7 3.27 3.39 118.5 -2.03 -0.53 23.0 82 15 13 17 7 2 2 0  SO4 1502 A SO4 1505 A
8 1.23 1.39 117.4 -1.62 -0.43 18.3 85 14 6 14 9 1 1 0  SO4 1503 A SO4 1502 B
9 1.73 1.84 131.6 -1.67 -0.49 17.6 82 13 11 16 10 3 2 0  SO4 1502 A
10 1.37 2.96 138.7 -1.35 -0.33 18.1 79 11 9 9 12 3 3 1  SO4 1503 D
11 1.36 1.35 149.5 -0.81 -0.18 17.7 82 12 9 8 14 2 1 1  SO4 1502 A SO4 1503 C
12 2.84 3.84 160.9 -2.54 -0.61 21.7 81 11 7 14 6 1 2 1  SO4 1505 A
13 1.44 1.45 170.9 -1.42 -0.36 21.0 82 15 15 12 12 3 2 1  SO4 1502 A
14 3.31 3.31 170.7 -1.53 -0.36 20.7 83 18 11 18 13 5 2 0  SO4 1502 C SO4 1503 C
15 1.26 1.41 180.9 -1.42 -0.33 21.2 82 16 13 11 16 2 2 1  SO4 1503 A SO4 1502 B
16 3.60 3.82 41.2 -3.03 -0.53 37.2 80 10 6 5 2 1 0 0  
17 3.28 3.46 43.9 -2.55 -0.48 29.7 82 8 5 6 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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