PDBsum entry 4gy5 Go to PDB code:  Tunnel analysis for: 4gy5 calculated with MOLE 2.0 PDB id 4gy5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.54 26.4 -1.54 -0.26 21.0 90 4 2 2 6 0 1 0   2 1.21 1.64 26.8 -0.50 0.03 10.6 83 2 2 3 3 3 1 0   3 1.40 1.67 29.6 -1.43 -0.34 22.6 77 4 4 2 2 4 0 0   4 1.34 1.53 29.6 -1.72 -0.20 23.6 90 4 2 2 6 0 1 0   5 1.40 1.67 32.8 -1.11 -0.24 19.3 75 4 5 1 2 4 2 0   6 1.40 1.66 35.9 -1.34 -0.30 22.6 74 7 4 1 2 5 0 0   7 1.40 1.66 37.6 -1.66 -0.38 24.8 75 5 5 1 2 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.