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PDBsum entry 4gvj

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protein ligands metals links
Hydrolase PDB id
4gvj

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
290 a.a.
Ligands
ADP
Metals
_MG ×2
Waters ×89
PDB id:
4gvj
Name: Hydrolase
Title: Tyk2 (jh1) in complex with adenosine di-phosphate
Structure: Non-receptor tyrosine-protein kinase tyk2. Chain: a. Fragment: kinase domain, unp residues 885-1176. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tyk2. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: tni.
Resolution:
2.03Å     R-factor:   0.190     R-free:   0.231
Authors: J.Liang,A.V.Abbema,L.Bao,K.Barrett,M.Beresini,L.Berezhkovskiy, W.Blair,C.Chang,J.Driscoll,C.Eigenbrot,N.Ghilardi,P.Gibbons, J.Halladay,A.Johnson,P.B.Kohli,Y.Lai,M.Liimatta,P.Mantik, K.Menghrajani,J.Murray,A.Sambrone,Y.Shao,S.Shia,Y.Shin,J.Smith, S.Sohn,M.Stanley,V.Tsui,M.Ultsch,L.Wu,B.Zhang,S.Magnuson
Key ref: J.Liang et al. (2013). Lead identification of novel and selective TYK2 inhibitors. Eur J Med Chem, 67, 175-187. PubMed id: 23867602 DOI: 10.1016/j.ejmech.2013.03.070
Date:
30-Aug-12     Release date:   14-Aug-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P29597  (TYK2_HUMAN) -  Non-receptor tyrosine-protein kinase TYK2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1187 a.a.
290 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
Bound ligand (Het Group name = ADP)
corresponds exactly
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.ejmech.2013.03.070 Eur J Med Chem 67:175-187 (2013)
PubMed id: 23867602  
 
 
Lead identification of novel and selective TYK2 inhibitors.
J.Liang, V.Tsui, A.Van Abbema, L.Bao, K.Barrett, M.Beresini, L.Berezhkovskiy, W.S.Blair, C.Chang, J.Driscoll, C.Eigenbrot, N.Ghilardi, P.Gibbons, J.Halladay, A.Johnson, P.B.Kohli, Y.Lai, M.Liimatta, P.Mantik, K.Menghrajani, J.Murray, A.Sambrone, Y.Xiao, S.Shia, Y.Shin, J.Smith, S.Sohn, M.Stanley, M.Ultsch, B.Zhang, L.C.Wu, S.Magnuson.
 
  ABSTRACT  
 
No abstract given.

 

 

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