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PDBsum entry 4gg8
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Pore analysis for: 4gg8 calculated with MOLE 2.0
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PDB id
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4gg8
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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22 pores,
coloured by radius |
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22 pores,
coloured by radius
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22 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.99 |
3.99 |
27.0 |
-0.05 |
-0.21 |
7.5 |
73 |
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1 |
3 |
1 |
3 |
0 |
2 |
0 |
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2 |
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3.66 |
4.05 |
28.0 |
-0.98 |
-0.48 |
12.2 |
76 |
3 |
2 |
3 |
1 |
1 |
1 |
0 |
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3 |
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4.07 |
4.67 |
34.1 |
-0.51 |
-0.42 |
14.1 |
84 |
1 |
3 |
2 |
4 |
0 |
0 |
0 |
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4 |
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2.82 |
2.82 |
39.4 |
-1.04 |
-0.45 |
10.3 |
76 |
3 |
0 |
3 |
2 |
1 |
2 |
0 |
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5 |
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3.35 |
4.20 |
40.9 |
-0.70 |
-0.31 |
10.7 |
74 |
4 |
3 |
3 |
4 |
1 |
3 |
1 |
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6 |
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3.67 |
4.04 |
41.1 |
-0.60 |
-0.46 |
11.4 |
87 |
3 |
1 |
3 |
4 |
0 |
0 |
0 |
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7 |
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3.90 |
4.08 |
41.8 |
-1.95 |
-0.53 |
20.5 |
94 |
4 |
4 |
12 |
2 |
0 |
0 |
0 |
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8 |
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3.65 |
4.04 |
42.0 |
-0.59 |
-0.35 |
9.8 |
77 |
3 |
1 |
3 |
3 |
0 |
2 |
0 |
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9 |
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3.37 |
4.21 |
44.8 |
-1.09 |
-0.34 |
14.4 |
75 |
4 |
3 |
3 |
5 |
0 |
2 |
1 |
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10 |
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3.93 |
3.95 |
47.2 |
-1.63 |
-0.43 |
19.5 |
86 |
4 |
6 |
9 |
3 |
1 |
1 |
0 |
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11 |
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3.91 |
4.08 |
47.5 |
-1.87 |
-0.45 |
22.0 |
88 |
4 |
6 |
9 |
3 |
0 |
0 |
0 |
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12 |
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3.35 |
3.55 |
47.7 |
-1.28 |
-0.42 |
15.2 |
86 |
4 |
4 |
8 |
4 |
0 |
2 |
1 |
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13 |
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4.11 |
4.68 |
51.2 |
-1.53 |
-0.33 |
20.5 |
81 |
4 |
8 |
6 |
4 |
1 |
1 |
0 |
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14 |
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3.36 |
4.22 |
51.7 |
-0.32 |
-0.23 |
8.4 |
75 |
4 |
1 |
2 |
5 |
0 |
4 |
1 |
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15 |
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3.33 |
3.55 |
52.9 |
-1.21 |
-0.42 |
13.5 |
84 |
4 |
4 |
8 |
5 |
0 |
2 |
1 |
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16 |
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3.35 |
3.55 |
53.8 |
-1.12 |
-0.33 |
15.3 |
81 |
4 |
6 |
6 |
5 |
0 |
2 |
1 |
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17 |
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2.94 |
2.94 |
54.2 |
-1.33 |
-0.45 |
15.2 |
89 |
2 |
4 |
8 |
5 |
0 |
2 |
0 |
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18 |
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3.34 |
3.55 |
56.8 |
-0.94 |
-0.30 |
13.4 |
78 |
4 |
6 |
6 |
6 |
1 |
3 |
1 |
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19 |
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3.32 |
3.55 |
59.4 |
-0.66 |
-0.30 |
9.5 |
78 |
4 |
4 |
6 |
7 |
0 |
4 |
2 |
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20 |
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2.95 |
2.94 |
61.6 |
-0.71 |
-0.35 |
8.8 |
80 |
2 |
4 |
5 |
8 |
0 |
4 |
1 |
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21 |
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2.95 |
2.94 |
65.2 |
-0.82 |
-0.33 |
11.0 |
79 |
3 |
4 |
3 |
6 |
0 |
4 |
1 |
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22 |
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2.01 |
3.41 |
119.0 |
-1.55 |
-0.55 |
15.8 |
83 |
8 |
5 |
8 |
5 |
1 |
2 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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