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PDBsum entry 4gg5

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protein ligands links
Transferase/transferase inhibitor PDB id
4gg5

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
274 a.a.
Ligands
0J3
Waters ×53
PDB id:
4gg5
Name: Transferase/transferase inhibitor
Title: Crystal structure of cmet in complex with novel inhibitor
Structure: Hepatocyte growth factor receptor. Chain: a. Synonym: hgf receptor, hgf/sf receptor, proto-oncogenE C-met, scatter factor receptor, sf receptor, tyrosine-protein kinase met. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: c-met, met. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.42Å     R-factor:   0.216     R-free:   0.268
Authors: Q.F.Liu,T.T.Chen,Y.C.Xu
Key ref: K.Wu et al. (2012). Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: synthesis and SAR study as tyrosine kinase c-Met inhibitors. Bioorg Med Chem Lett, 22, 6368-6372. PubMed id: 22985853
Date:
05-Aug-12     Release date:   03-Oct-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08581  (MET_HUMAN) -  Hepatocyte growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1390 a.a.
274 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Bioorg Med Chem Lett 22:6368-6372 (2012)
PubMed id: 22985853  
 
 
Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: synthesis and SAR study as tyrosine kinase c-Met inhibitors.
K.Wu, J.Ai, Q.Liu, T.Chen, A.Zhao, X.Peng, Y.Wang, Y.Ji, Q.Yao, Y.Xu, M.Geng, A.Zhang.
 
  ABSTRACT  
 
Two series of new analogues were designed by replacing the quinoline scaffold of our earlier lead 2 (zgwatinib) with quinoxaline and pyrido[2,3-d]pyrimidine frameworks. Moderate c-Met inhibitory activity was observed in the quinoxaline series. Among the pyrido[2,3-d]pyrimidine series, compounds 13a-c possessing an O-linkage were inactive, whilst the N-linked analogues 15a-c retained c-Met inhibitory potency. Highest activity was observed in the 3-nitrobenzyl analog 15b that showed an IC(50) value of 6.5nM. Further structural modifications based on this compound were undergoing.
 

 

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