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PDBsum entry 4ger

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ger calculated with MOLE 2.0 PDB id
4ger
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.30 21.6 -0.55 0.12 21.9 87 3 3 3 3 1 0 0  THR 405 A LYS 406 A
2 1.20 1.33 32.4 -1.46 0.03 23.3 77 4 5 3 3 5 0 0  THR 405 A LYS 406 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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